Recent Publications

ALSUntangled #63: ketogenic diets.
Bedlack, R, Barkhaus, PE, Barnes, B, Beauchamp, M, Bertorini, T, Bromberg, MB, Carter, GT, Chaudry, V, Cudkowicz, M, Jackson, C, Levitsky, G, Lund, I, McDermott, C, Novella, S, Olby, N, Ostrow, L, Pattee, GL, Heiman-Patterson, T, Ratner, D, Salmon, K, Steves, S, Terrelonge, M, Wicks, P, Wills, AM
Amyotroph Lateral Scler Frontotemporal Degener. 2021; :1-5. doi: 10.1080/21678421.2021.1990346. PubMed PMID:34645313 .

Evidence that pubertal status impacts KNDy neurons in the gilt.
Harlow, K, Renwick, AN, Shuping, SL, Sommer, JR, Lents, CA, Knauer, MT, Nestor, CC
Biol Reprod. 2021; :. doi: 10.1093/biolre/ioab189. PubMed PMID:34643223 .

Effects of early geometric confinement on the transcriptomic profile of human cerebral organoids.
Sen, D, Voulgaropoulos, A, Keung, AJ
BMC Biotechnol. 2021;21 (1):59. doi: 10.1186/s12896-021-00718-2. PubMed PMID:34641840 .

Molecular and Metabolic Insights into Anthocyanin Biosynthesis for Leaf Color Change in Chokecherry (Padus virginiana).
Li, X, Li, Y, Zhao, M, Hu, Y, Meng, F, Song, X, Tigabu, M, Chiang, VL, Sederoff, R, Ma, W, Zhao, X
Int J Mol Sci. 2021;22 (19):. doi: 10.3390/ijms221910697. PubMed PMID:34639038 .

Coupling high-throughput mapping with proteomics analysis delineates cis-regulatory elements at high resolution.
Wu, T, Jiang, D, Zou, M, Sun, W, Wu, D, Cui, J, Huntress, I, Peng, X, Li, G
Nucleic Acids Res. 2021; :. doi: 10.1093/nar/gkab890. PubMed PMID:34634809 .

A Zebrafish Model of Metastatic Colonization Pinpoints Cellular Mechanisms of Circulating Tumor Cell Extravasation.
Allen, TA, Cullen, MM, Hawkey, N, Mochizuki, H, Nguyen, L, Schechter, E, Borst, L, Yoder, JA, Freedman, JA, Patierno, SR, Cheng, K, Eward, WC, Somarelli, JA
Front Oncol. 2021;11 :641187. doi: 10.3389/fonc.2021.641187. PubMed PMID:34631514 PubMed Central PMC8495265.

Multi-Omics Analyses Reveal the Regulatory Network and the Function of ZmUGTs in Maize Defense Response.
Ge, C, Wang, YG, Lu, S, Zhao, XY, Hou, BK, Balint-Kurti, PJ, Wang, GF
Front Plant Sci. 2021;12 :738261. doi: 10.3389/fpls.2021.738261. PubMed PMID:34630489 PubMed Central PMC8497902.

Genome and transcriptome sequencing of the green bottle fly, Lucilia sericata, reveals underlying factors of sheep flystrike and maggot debridement therapy.
Davis, RJ, Belikoff, EJ, Dickey, AN, Scholl, EH, Benoit, JB, Scott, MJ
Genomics. 2021;113 (6):3978-3988. doi: 10.1016/j.ygeno.2021.10.003. PubMed PMID:34619342 .

Integrated omics networks reveal the temporal signaling events of brassinosteroid response in Arabidopsis.
Clark, NM, Nolan, TM, Wang, P, Song, G, Montes, C, Valentine, CT, Guo, H, Sozzani, R, Yin, Y, Walley, JW
Nat Commun. 2021;12 (1):5858. doi: 10.1038/s41467-021-26165-3. PubMed PMID:34615886 PubMed Central PMC8494934.

Invasive Plants as Foci of Mosquito-Borne Pathogens: Red Cedar in the Southern Great Plains of the USA.
Noden, BH, Cote, NM, Reiskind, MH, Talley, JL
Ecohealth. 2021; :. doi: 10.1007/s10393-021-01562-8. PubMed PMID:34613506 .

Reduced Endometrial Ascension and Enhanced Reinfection Associated with IgG Antibodies to Specific Chlamydia trachomatis Proteins in Women at Risk for Chlamydia.
Liu, C, Hufnagel, K, O'Connell, CM, Goonetilleke, N, Mokashi, N, Waterboer, T, Tollison, TS, Peng, X, Wiesenfeld, HC, Hillier, SL, Zheng, X, Darville, T
J Infect Dis. 2021; :. doi: 10.1093/infdis/jiab496. PubMed PMID:34610131 .

Gene regulatory networks for compatible versus incompatible grafts identify a role for SlWOX4 during junction formation.
Thomas, H, Van den Broeck, L, Spurney, R, Sozzani, R, Frank, M
Plant Cell. 2021; :. doi: 10.1093/plcell/koab246. PubMed PMID:34609518 .

Polymorphisms in the serotonin transporter gene and circulating concentrations of neurotransmitters in Cavalier King Charles Spaniels with myxomatous mitral valve disease.
Reimann, MJ, Fredholm, M, Cremer, SE, Christiansen, LB, Meurs, KM, Møller, JE, Häggström, J, Lykkesfeldt, J, Olsen, LH
J Vet Intern Med. 2021; :. doi: 10.1111/jvim.16277. PubMed PMID:34599615 .

The effect of piscidin antimicrobial peptides on the formation of Gram-negative bacterial biofilms.
Prior, BS, Lange, MD, Salger, SA, Reading, BJ, Peatman, E, Beck, BH
J Fish Dis. 2021; :. doi: 10.1111/jfd.13540. PubMed PMID:34590712 .

Development of infrastructure for a systemic multidisciplinary approach to study aging in retired sled dogs.
Fleyshman, DI, Wakshlag, JJ, Huson, HJ, Loftus, JP, Olby, NJ, Brodsky, L, Gudkov, AV, Andrianova, EL
Aging (Albany NY). 2021;13 (18):21814-21837. doi: 10.18632/aging.203600. PubMed PMID:34587118 PubMed Central PMC8507265.

A bioinspired, passive microfluidic lobe filtration system.
Clark, AS, San-Miguel, A
Lab Chip. 2021;21 (19):3762-3774. doi: 10.1039/d1lc00449b. PubMed PMID:34581374 PubMed Central PMC8486309.

Histone Acetylation Changes in Plant Response to Drought Stress.
Li, S, He, X, Gao, Y, Zhou, C, Chiang, VL, Li, W
Genes (Basel). 2021;12 (9):. doi: 10.3390/genes12091409. PubMed PMID:34573391 PubMed Central PMC8468061.

Transcriptomic profiling in canines and humans reveals cancer specific gene modules and biological mechanisms common to both species.
Tawa, GJ, Braisted, J, Gerhold, D, Grewal, G, Mazcko, C, Breen, M, Sittampalam, G, LeBlanc, AK
PLoS Comput Biol. 2021;17 (9):e1009450. doi: 10.1371/journal.pcbi.1009450. PubMed PMID:34570764 .

An Integrative Co-localization (INCO) Analysis for SNV and CNV Genomic Features With an Application to Taiwan Biobank Data.
Yu, QY, Lu, TP, Hsiao, TH, Lin, CH, Wu, CY, Tzeng, JY, Hsiao, CK
Front Genet. 2021;12 :709555. doi: 10.3389/fgene.2021.709555. PubMed PMID:34567069 PubMed Central PMC8456116.

Editorial overview: Toward deciphering the molecular basis of plant phenotypic plasticity.
Qiao, H, Stepanova, AN
Curr Opin Plant Biol. 2021;63 :102107. doi: 10.1016/j.pbi.2021.102107. PubMed PMID:34560602 .