Recent Publications

A Calcium Imaging Approach to Measure Functional Sensitivity of Neurons.
Wheeler, JJ, Davis, JM, Mishra, SK
Methods Mol Biol. 2022;2413 :97-106. doi: 10.1007/978-1-0716-1896-7_11. PubMed PMID:35044658 .

Alternative splicing of CsJAZ1 negatively regulates flavan-3-ols biosynthesis in tea plants.
Zhu, J, Yan, X, Liu, S, Xia, X, An, Y, Xu, Q, Zhao, S, Liu, L, Guo, R, Zhang, Z, Xie, DY, Wei, C
Plant J. 2022; :. doi: 10.1111/tpj.15670. PubMed PMID:35043493 .

brca2-mutant zebrafish exhibit context- and tissue-dependent alterations in cell phenotypes and response to injury.
Kouprianov, VA, Selmek, AA, Ferguson, JL, Mo, X, Shive, HR
Sci Rep. 2022;12 (1):883. doi: 10.1038/s41598-022-04878-9. PubMed PMID:35042909 .

The Cyanotoxin 2,4-DAB Reduces Viability and Causes Behavioral and Molecular Dysfunctions Associated with Neurodegeneration in Larval Zebrafish.
Martin, RM, Bereman, MS, Marsden, KC
Neurotox Res. 2022; :. doi: 10.1007/s12640-021-00465-4. PubMed PMID:35029765 .

Polygenic risk modeling for prediction of epithelial ovarian cancer risk.
Dareng, EO, Tyrer, JP, Barnes, DR, Jones, MR, Yang, X, Aben, KKH, Adank, MA, Agata, S, Andrulis, IL, Anton-Culver, H, Antonenkova, NN, Aravantinos, G, Arun, BK, Augustinsson, A, Balmaña, J, Bandera, EV, Barkardottir, RB, Barrowdale, D, Beckmann, MW, Beeghly-Fadiel, A, Benitez, J, Bermisheva, M, Bernardini, MQ, Bjorge, L, Black, A, Bogdanova, NV, Bonanni, B, Borg, A, Brenton, JD, Budzilowska, A, Butzow, R, Buys, SS, Cai, H, Caligo, MA, Campbell, I, Cannioto, R, Cassingham, H, Chang-Claude, J, Chanock, SJ, Chen, K, Chiew, YE, Chung, WK, Claes, KBM, Colonna, S, GEMO Study Collaborators, GC-HBOC Study Collaborators, EMBRACE Collaborators, Cook, LS, Couch, FJ, Daly, MB, Dao, F, Davies, E, de la Hoya, M, de Putter, R, Dennis, J, DePersia, A, Devilee, P, Diez, O, Ding, YC, Doherty, JA, Domchek, SM, Dörk, T, du Bois, A, Dürst, M, Eccles, DM, Eliassen, HA, Engel, C, Evans, GD, Fasching, PA, Flanagan, JM, Fortner, RT, Machackova, E, Friedman, E, Ganz, PA, Garber, J, Gensini, F, Giles, GG, Glendon, G, Godwin, AK, Goodman, MT, Greene, MH, Gronwald, J, OPAL Study Group, AOCS Group, Hahnen, E, Haiman, CA, Håkansson, N, Hamann, U, Hansen, TVO, Harris, HR, Hartman, M, Heitz, F, Hildebrandt, MAT, Høgdall, E, Høgdall, CK, Hopper, JL, Huang, RY, Huff, C, Hulick, PJ, Huntsman, DG, Imyanitov, EN, KConFab Investigators, HEBON Investigators, Isaacs, C, Jakubowska, A, James, PA, Janavicius, R, Jensen, A, Johannsson, OT, John, EM, Jones, ME, Kang, D, Karlan, BY, Karnezis, A, Kelemen, LE, Khusnutdinova, E, Kiemeney, LA, Kim, BG, Kjaer, SK, Komenaka, I, Kupryjanczyk, J, Kurian, AW, Kwong, A, Lambrechts, D, Larson, MC, Lazaro, C, Le, ND, Leslie, G, Lester, J, Lesueur, F, Levine, DA, Li, L, Li, J, Loud, JT, Lu, KH, Lubiński, J, Mai, PL, Manoukian, S, Marks, JR, Matsuno, RK, Matsuo, K, May, T, McGuffog, L, McLaughlin, JR, McNeish, IA, Mebirouk, N, Menon, U, Miller, A, Milne, RL, Minlikeeva, A, Modugno, F, Montagna, M, Moysich, KB, Munro, E, Nathanson, KL, Neuhausen, SL, Nevanlinna, H, Yie, JNY, Nielsen, HR, Nielsen, FC, Nikitina-Zake, L, Odunsi, K, Offit, K, Olah, E, Olbrecht, S, Olopade, OI, Olson, SH, Olsson, H, Osorio, A, Papi, L, Park, SK, Parsons, MT, Pathak, H, Pedersen, IS, Peixoto, A, Pejovic, T, Perez-Segura, P, Permuth, JB, Peshkin, B, Peterlongo, P, Piskorz, A, Prokofyeva, D, Radice, P, Rantala, J, Riggan, MJ, Risch, HA, Rodriguez-Antona, C, Ross, E, Rossing, MA, Runnebaum, I, Sandler, DP, Santamariña, M, Soucy, P, Schmutzler, RK, Setiawan, VW, Shan, K, Sieh, W, Simard, J, Singer, CF, Sokolenko, AP, Song, H, Southey, MC, Steed, H, Stoppa-Lyonnet, D, Sutphen, R, Swerdlow, AJ, Tan, YY, Teixeira, MR, Teo, SH, Terry, KL, Terry, MB, OCAC Consortium, CIMBA Consortium, Thomassen, M, Thompson, PJ, Thomsen, LCV, Thull, DL, Tischkowitz, M, Titus, L, Toland, AE, Torres, D, Trabert, B, Travis, R, Tung, N, Tworoger, SS, Valen, E, van Altena, AM, van der Hout, AH, Van Nieuwenhuysen, E, van Rensburg, EJ, Vega, A, Edwards, DV, Vierkant, RA, Wang, F, Wappenschmidt, B, Webb, PM, Weinberg, CR, Weitzel, JN, Wentzensen, N, White, E, Whittemore, AS, Winham, SJ, Wolk, A, Woo, YL, Wu, AH, Yan, L, Yannoukakos, D, Zavaglia, KM, Zheng, W, Ziogas, A, Zorn, KK, Kleibl, Z, Easton, D, Lawrenson, K, DeFazio, A, Sellers, TA, Ramus, SJ, Pearce, CL, Monteiro, AN, Cunningham, J, Goode, EL, Schildkraut, JM, Berchuck, A, Chenevix-Trench, G, Gayther, SA, Antoniou, AC, Pharoah, PDP
Eur J Hum Genet. 2022; :. doi: 10.1038/s41431-021-00987-7. PubMed PMID:35027648 .

Turning CRISPR on with antibiotics.
Barrangou, R, Marraffini, LA
Cell Host Microbe. 2022;30 (1):12-14. doi: 10.1016/j.chom.2021.12.013. PubMed PMID:35026132 .

To Fight or to Grow: The Balancing Role of Ethylene in Plant Abiotic Stress Responses.
Chen, H, Bullock, DA Jr, Alonso, JM, Stepanova, AN
Plants (Basel). 2021;11 (1):. doi: 10.3390/plants11010033. PubMed PMID:35009037 PubMed Central PMC8747122.

Sustained Gaze Is a Reliable In-home Test of Attention for Aging Pet Dogs.
Hoel, JA, Templeton, GB, Fefer, G, Case, BC, Shah, A, Gruen, ME, Olby, NJ
Front Vet Sci. 2021;8 :819135. doi: 10.3389/fvets.2021.819135. PubMed PMID:35004935 PubMed Central PMC8732866.

Developing a predictive model for spinal shock in dogs with spinal cord injury.
McBride, R, Parker, E, Garabed, RB, Olby, NJ, Tipold, A, Stein, VM, Granger, N, Hechler, AC, Yaxley, PE, Moore, SA, CANSORT-SCI study investigators
J Vet Intern Med. 2022; :. doi: 10.1111/jvim.16352. PubMed PMID:35001437 .

Single-Cell-Based High-Throughput Ig and TCR Repertoire Sequencing Analysis in Rhesus Macaques.
Walsh, ES, Tollison, TS, Brochu, HN, Shaw, BI, Diveley, KR, Chou, H, Law, L, Kirk, AD, Gale, M Jr, Peng, X
J Immunol. 2022;208 (3):762-771. doi: 10.4049/jimmunol.2100824. PubMed PMID:34987112 .

On the relationship between extant innate immune receptors and the evolutionary origins of jawed vertebrate adaptive immunity.
Dornburg, A, Yoder, JA
Immunogenetics. 2022; :. doi: 10.1007/s00251-021-01232-7. PubMed PMID:34981186 .

Exploring the role of gut microbiota in host feeding behavior among breeds in swine.
He, Y, Tiezzi, F, Howard, J, Huang, Y, Gray, K, Maltecca, C
BMC Microbiol. 2022;22 (1):1. doi: 10.1186/s12866-021-02409-6. PubMed PMID:34979903 PubMed Central PMC8722167.

Comparative Assessment of Pesticide Exposures in Domestic Dogs and Their Owners Using Silicone Passive Samplers and Biomonitoring.
Wise, CF, Hammel, SC, Herkert, NJ, Ospina, M, Calafat, AM, Breen, M, Stapleton, HM
Environ Sci Technol. 2022;56 (2):1149-1161. doi: 10.1021/acs.est.1c06819. PubMed PMID:34964617 .

Metarhizium anisopliae is a valuable grist for biocontrol in beta-cypermethrin-resistant Blattella germanica (L.).
Zhang, XC, Jiang, M, Zang, YN, Zhao, HZ, Liu, CX, Liu, BR, Xue, H, Schal, C, Lu, XM, Zhao, DQ, Zhang, XX, Zhang, F
Pest Manag Sci. 2021; :. doi: 10.1002/ps.6769. PubMed PMID:34962342 .

Cell-by-cell dissection of phloem development links a maturation gradient to cell specialization.
Roszak, P, Heo, JO, Blob, B, Toyokura, K, Sugiyama, Y, de Luis Balaguer, MA, Lau, WWY, Hamey, F, Cirrone, J, Madej, E, Bouatta, AM, Wang, X, Guichard, M, Ursache, R, Tavares, H, Verstaen, K, Wendrich, J, Melnyk, CW, Oda, Y, Shasha, D, Ahnert, SE, Saeys, Y, De Rybel, B, Heidstra, R, Scheres, B, Grossmann, G, Mähönen, AP, Denninger, P, Göttgens, B, Sozzani, R, Birnbaum, KD, Helariutta, Y
Science. 2021;374 (6575):eaba5531. doi: 10.1126/science.aba5531. PubMed PMID:34941412 PubMed Central PMC8730638.

From IgZ to IgT: A Call for a Common Nomenclature for Immunoglobulin Heavy Chain Genes of Ray-Finned Fish.
Dornburg, A, Ota, T, Criscitiello, MF, Salinas, I, Sunyer, JO, Magadán, S, Boudinot, P, Xu, Z, Flajnik, MF, Singer, A, Gambón-Deza, F, Hansen, JD, Yoder, JA
Zebrafish. 2021;18 (6):343-345. doi: 10.1089/zeb.2021.0071. PubMed PMID:34935497 PubMed Central PMC8716470.

Genome evolution in an agricultural pest following adoption of transgenic crops.
Taylor, KL, Hamby, KA, DeYonke, AM, Gould, F, Fritz, ML
Proc Natl Acad Sci U S A. 2021;118 (52):. doi: 10.1073/pnas.2020853118. PubMed PMID:34930832 .

Domestication reshaped the genetic basis of inbreeding depression in a maize landrace compared to its wild relative, teosinte.
Samayoa, LF, Olukolu, BA, Yang, CJ, Chen, Q, Stetter, MG, York, AM, Sanchez-Gonzalez, JJ, Glaubitz, JC, Bradbury, PJ, Romay, MC, Sun, Q, Yang, J, Ross-Ibarra, J, Buckler, ES, Doebley, JF, Holland, JB
PLoS Genet. 2021;17 (12):e1009797. doi: 10.1371/journal.pgen.1009797. PubMed PMID:34928949 PubMed Central PMC8722731.

The evolution of innate immune receptors: investigating the diversity, distribution, and phylogeny of immune recognition across eukaryotes.
Buckley, KM, Yoder, JA
Immunogenetics. 2021; :. doi: 10.1007/s00251-021-01243-4. PubMed PMID:34910229 PubMed Central PMC8671053.

An experimental strategy for preparing circular ssDNA virus genomes for next-generation sequencing.
Aimone, CD, Hoyer, JS, Dye, AE, Deppong, DO, Duffy, S, Carbone, I, Hanley-Bowdoin, L
J Virol Methods. 2022;300 :114405. doi: 10.1016/j.jviromet.2021.114405. PubMed PMID:34896458 .